Along with CatKiller's advice:
Deja-dup does not yet supply a way of removing old backups, you should not delete some of the files, that might leave your backups without a start file and render them invalid.
Also worth noting, You can use the Dconf editor to modify setting at path org.gnome.DejaDup, key name delete-after. It's set to the number of days to keep backup files on backup location.
Or from terminal. to set it to 60 days from the command line, run example:
Code:
gsettings set org.gnome.DejaDup delete-after 60
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