Hi,
Hope someone can help me. I have a VPS on a DL380 g5 the vps has 3 cores with 6gb ram and 120gb hdd. However the mysql keeps going up to 170% and more. i restart the service it's fine for 15 - 20 mins then boom the server nearly grinds to a hault.
Here is my mysqltuner output.
Code:
[OK] Operating on 64-bit architecture
-------- Log file Recommendations ------------------------------------------------------------------
[--] Log file: /var/log/mysql/error.log(217K)
[OK] Log file /var/log/mysql/error.log exists
[OK] Log file /var/log/mysql/error.log is readable.
[OK] Log file /var/log/mysql/error.log is not empty
[OK] Log file /var/log/mysql/error.log is smaller than 32 Mb
[!!] /var/log/mysql/error.log contains 68 warning(s).
[!!] /var/log/mysql/error.log contains 115 error(s).
[--] 15 start(s) detected in /var/log/mysql/error.log
[--] 1) 2017-07-11T17:31:19.137881Z 0 [Note] /usr/sbin/mysqld: ready for connections.
[--] 2) 2017-07-11T17:31:04.157604Z 0 [Note] /usr/sbin/mysqld: ready for connections.
[--] 3) 2017-07-11T17:30:44.392633Z 0 [Note] /usr/sbin/mysqld: ready for connections.
[--] 4) 2017-07-11T17:27:33.946023Z 0 [Note] /usr/sbin/mysqld: ready for connections.
[--] 5) 2017-07-11T17:26:53.968865Z 0 [Note] /usr/sbin/mysqld: ready for connections.
[--] 6) 2017-07-11T17:22:43.646019Z 0 [Note] /usr/sbin/mysqld: ready for connections.
[--] 7) 2017-07-11T17:21:53.988417Z 0 [Note] /usr/sbin/mysqld: ready for connections.
[--] 8) 2017-07-11T17:09:30.748352Z 0 [Note] /usr/sbin/mysqld: ready for connections.
[--] 9) 2017-07-11T12:16:36.234917Z 0 [Note] /usr/sbin/mysqld: ready for connections.
[--] 10) 2017-07-11T10:29:28.147523Z 0 [Note] /usr/sbin/mysqld: ready for connections.
[--] 13 shutdown(s) detected in /var/log/mysql/error.log
[--] 1) 2017-07-11T17:31:18.251678Z 0 [Note] /usr/sbin/mysqld: Shutdown complete
[--] 2) 2017-07-11T17:31:03.263566Z 0 [Note] /usr/sbin/mysqld: Shutdown complete
[--] 3) 2017-07-11T17:30:43.366214Z 0 [Note] /usr/sbin/mysqld: Shutdown complete
[--] 4) 2017-07-11T17:27:33.140074Z 0 [Note] /usr/sbin/mysqld: Shutdown complete
[--] 5) 2017-07-11T17:26:53.131944Z 0 [Note] /usr/sbin/mysqld: Shutdown complete
[--] 6) 2017-07-11T17:22:42.941694Z 0 [Note] /usr/sbin/mysqld: Shutdown complete
[--] 7) 2017-07-11T17:21:52.995197Z 0 [Note] /usr/sbin/mysqld: Shutdown complete
[--] 8) 2017-07-11T17:05:31.490360Z 0 [Note] /usr/sbin/mysqld: Shutdown complete
[--] 9) 2017-07-11T12:12:35.976532Z 0 [Note] /usr/sbin/mysqld: Shutdown complete
[--] 10) 2017-07-11T10:25:24.201706Z 0 [Note] /usr/sbin/mysqld: Shutdown complete
-------- Storage Engine Statistics -----------------------------------------------------------------
[--] Status: +ARCHIVE +BLACKHOLE +CSV -FEDERATED +InnoDB +MEMORY +MRG_MYISAM +MyISAM +PERFORMANCE_SCHEMA
[--] Data in InnoDB tables: 429M (Tables: 53)
[--] Data in MyISAM tables: 140M (Tables: 40)
[OK] Total fragmented tables: 0
-------- Security Recommendations ------------------------------------------------------------------
[OK] There are no anonymous accounts for any database users
[OK] All database users have passwords assigned
[--] There are 605 basic passwords in the list.
-------- CVE Security Recommendations --------------------------------------------------------------
[--] Skipped due to --cvefile option undefined
-------- Performance Metrics -----------------------------------------------------------------------
[--] Up for: 26m 32s (339K q [213.303 qps], 3K conn, TX: 2G, RX: 40M)
[--] Reads / Writes: 97% / 3%
[--] Binary logging is disabled
[--] Physical Memory : 5.8G
[--] Max MySQL memory : 1.2G
[--] Other process memory: 2.1G
[--] Total buffers: 1.1G global + 1.1M per thread (151 max threads)
[--] P_S Max memory usage: 72B
[--] Galera GCache Max memory usage: 0B
[OK] Maximum reached memory usage: 1.1G (18.77% of installed RAM)
[OK] Maximum possible memory usage: 1.2G (20.95% of installed RAM)
[OK] Overall possible memory usage with other process is compatible with memory available
[OK] Slow queries: 0% (0/339K)
[OK] Highest usage of available connections: 19% (29/151)
[OK] Aborted connections: 0.22% (7/3208)
[!!] name resolution is active : a reverse name resolution is made for each new connection and can reduce performance
[!!] Query cache may be disabled by default due to mutex contention.
[!!] Query cache efficiency: 0.0% (0 cached / 305K selects)
[OK] Query cache prunes per day: 0
[OK] Sorts requiring temporary tables: 0% (547 temp sorts / 61K sorts)
[!!] Joins performed without indexes: 2156
[!!] Temporary tables created on disk: 61% (19K on disk / 31K total)
[OK] Thread cache hit rate: 97% (92 created / 3K connections)
[!!] Table cache hit rate: 12% (416 open / 3K opened)
[OK] Open file limit used: 31% (324/1K)
[!!] Table locks acquired immediately: 93%
-------- Performance schema ------------------------------------------------------------------------
[--] Memory used by P_S: 72B
[--] Sys schema is installed.
-------- ThreadPool Metrics ------------------------------------------------------------------------
[--] ThreadPool stat is disabled.
-------- MyISAM Metrics ----------------------------------------------------------------------------
[OK] Key buffer used: 96.4% (16M used / 16M cache)
[OK] Key buffer size / total MyISAM indexes: 16.0M/37.4M
[OK] Read Key buffer hit rate: 99.9% (14M cached / 13K reads)
[!!] Write Key buffer hit rate: 89.1% (2K cached / 2K writes)
-------- InnoDB Metrics ----------------------------------------------------------------------------
[--] InnoDB is enabled.
[--] InnoDB Thread Concurrency: 0
[OK] InnoDB File per table is activated
[OK] InnoDB buffer pool / data size: 1.0G/429.4M
[!!] Ratio InnoDB log file size / InnoDB Buffer pool size (9.375 %): 48.0M * 2/1.0G should be equal 25%
[!!] InnoDB buffer pool <= 1G and Innodb_buffer_pool_instances(!=1).
[--] Number of InnoDB Buffer Pool Chunk : 8 for 8 Buffer Pool Instance(s)
[OK] Innodb_buffer_pool_size aligned with Innodb_buffer_pool_chunk_size & Innodb_buffer_pool_instances
[OK] InnoDB Read buffer efficiency: 99.97% (2982188 hits/ 2983025 total)
[!!] InnoDB Write Log efficiency: 61.94% (166 hits/ 268 total)
[OK] InnoDB log waits: 0.00% (0 waits / 102 writes)
-------- AriaDB Metrics ----------------------------------------------------------------------------
[--] AriaDB is disabled.
-------- TokuDB Metrics ----------------------------------------------------------------------------
[--] TokuDB is disabled.
-------- XtraDB Metrics ----------------------------------------------------------------------------
[--] XtraDB is disabled.
-------- RocksDB Metrics ---------------------------------------------------------------------------
[--] RocksDB is disabled.
-------- Spider Metrics ----------------------------------------------------------------------------
[--] Spider is disabled.
-------- Connect Metrics ---------------------------------------------------------------------------
[--] Connect is disabled.
-------- Galera Metrics ----------------------------------------------------------------------------
[--] Galera is disabled.
-------- Replication Metrics -----------------------------------------------------------------------
[--] Galera Synchronous replication: NO
[--] No replication slave(s) for this server.
[--] This is a standalone server.
-------- Recommendations ---------------------------------------------------------------------------
General recommendations:
Control warning line(s) into /var/log/mysql/error.log file
Control error line(s) into /var/log/mysql/error.log file
MySQL started within last 24 hours - recommendations may be inaccurate
Configure your accounts with ip or subnets only, then update your configuration with skip-name-resolve=1
Adjust your join queries to always utilize indexes
When making adjustments, make tmp_table_size/max_heap_table_size equal
Reduce your SELECT DISTINCT queries which have no LIMIT clause
Increase table_open_cache gradually to avoid file descriptor limits
Read this before increasing table_open_cache over 64: http://bit.ly/1mi7c4C
Beware that open_files_limit (1024) variable
should be greater than table_open_cache (431)
Optimize queries and/or use InnoDB to reduce lock wait
Variables to adjust:
query_cache_size (=0)
query_cache_type (=0)
query_cache_limit (> 1M, or use smaller result sets)
join_buffer_size (> 256.0K, or always use indexes with joins)
tmp_table_size (> 16M)
max_heap_table_size (> 16M)
table_open_cache (> 431)
innodb_log_file_size * innodb_log_files_in_group should be equal to 1/4 of buffer pool size (=512M) if possible.
innodb_buffer_pool_instances (=1)
now my vmstat 3 output.
Code:
procs -----------memory---------- ---swap-- -----io---- -system-- ------cpu-----
r b swpd free buff cache si so bi bo in cs us sy id wa st
3 0 0 4024296 68528 996072 0 0 92 29 155 490 38 20 41 1 0
4 0 0 4004580 68544 996108 0 0 33 21 610 1694 39 20 40 0 0
1 0 0 3940632 68544 996188 0 0 0 0 390 1511 48 25 27 0 0
2 0 0 3959644 68552 996196 0 0 0 35 416 1573 42 15 43 0 0
2 0 0 3999848 68560 996380 0 0 84 15 442 1215 32 14 54 1 0
1 0 0 4009988 68560 995944 0 0 0 0 340 1099 33 18 49 0 0
1 0 0 4011532 68568 995860 0 0 0 45 459 1553 43 22 35 0 0
my df -h output
Code:
Filesystem Size Used Avail Use% Mounted on
udev 2.9G 0 2.9G 0% /dev
tmpfs 596M 16M 581M 3% /run
/dev/sda1 93G 25G 64G 28% /
tmpfs 3.0G 0 3.0G 0% /dev/shm
tmpfs 5.0M 0 5.0M 0% /run/lock
tmpfs 3.0G 0 3.0G 0% /sys/fs/cgroup
tmpfs 596M 0 596M 0% /run/user/1000
my top command.
Code:
top - 19:02:31 up 56 min, 2 users, load average: 3.73, 3.05, 2.97Tasks: 153 total, 3 running, 150 sleeping, 0 stopped, 0 zombie
%Cpu(s): 38.8 us, 21.0 sy, 0.0 ni, 40.1 id, 0.0 wa, 0.0 hi, 0.1 si, 0.0 st
KiB Mem : 6102204 total, 3770324 free, 1258796 used, 1073084 buff/cache
KiB Swap: 6288380 total, 6288380 free, 0 used. 4496716 avail Mem
PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND
3480 mysql 20 0 3129000 514260 19104 S 134.9 8.4 36:59.67 mysqld
10095 www-data 20 0 507780 85876 53520 S 7.3 1.4 0:00.35 apache2
10073 www-data 20 0 426900 73596 46204 S 6.3 1.2 0:00.44 apache2
10093 www-data 20 0 507240 85220 53396 S 5.3 1.4 0:00.30 apache2
10069 www-data 20 0 508928 89828 56408 S 4.0 1.5 0:00.66 apache2
10062 www-data 20 0 498780 80568 57080 S 3.0 1.3 0:00.88 apache2
10015 www-data 20 0 505504 87500 57336 S 2.7 1.4 0:02.22 apache2
10018 www-data 20 0 511408 94528 58356 S 2.7 1.5 0:04.46 apache2
10039 www-data 20 0 519284 105648 61656 S 2.7 1.7 0:01.99 apache2
10020 www-data 20 0 511176 94116 58136 S 2.0 1.5 0:04.31 apache2
10066 www-data 20 0 513184 95616 57660 S 2.0 1.6 0:01.79 apache2
10094 www-data 20 0 412244 38880 26460 R 1.7 0.6 0:00.10 apache2
8179 www-data 20 0 511600 98320 61976 S 1.3 1.6 0:07.60 apache2
10044 www-data 20 0 509232 95128 61116 S 0.7 1.6 0:03.06 apache2
10045 www-data 20 0 509132 91148 57232 S 0.7 1.5 0:02.32 apache2
10068 www-data 20 0 496404 77208 56228 S 0.7 1.3 0:00.56 apache2
7 root 20 0 0 0 0 R 0.3 0.0 0:10.49 rcu_sched
2071 monster+ 20 0 41996 4004 3240 S 0.3 0.1 0:08.69 top
2617 root 20 0 407032 33436 25944 S 0.3 0.5 0:04.70 apache2
7988 root 20 0 0 0 0 S 0.3 0.0 0:00.80 kworker/0:1
10048 www-data 20 0 499128 85808 62000 S 0.3 1.4 0:01.58 apache2
1 root 20 0 37608 5676 4004 S 0.0 0.1 0:03.90 systemd
2 root 20 0 0 0 0 S 0.0 0.0 0:00.00 kthreadd
any help would be greatly appreciated as I have no idea what's causing it.
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