What instructions are you following exactly? afaik your boot partition is sda1 - from your boot-repair pastebin
Code:
Model: ATA WDC WD10EZRX-00A (scsi)
Disk /dev/sda: 1000GB
Sector size (logical/physical): 512B/4096B
Partition Table: msdos
Number Start End Size Type File system Flags
1 1049kB 302MB 301MB primary ext2 boot
2 302MB 1000GB 1000GB extended
5 303MB 1000GB 1000GB logical lvm
I agree with the earlier poster - re-running the recommended boot-repair and posting back with any errors / messages is how I'd proceed at this point - I'm not familiar enough with boot-repair to understand everything it reports, but it seems to be correctly detecting (and even mounting) your LVM volumes so it appears to be 'LVM2 aware', I'm not sure you'll gain anything by doing it manually (unless it fails). I have a 12.04 server box with an LVM root setup and my boot-repair report looks very similar.
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