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Thanks. My Synaptic and other applications are working now. :) :)
One more thing, I tried searching about Polipo but could not understand its working. Can you just tell me what exactly is Polipo and...

I am using Ubuntu 12.04 Precise Pangolin.
I want to use Synaptic Package manager and apt-get via socks proxy.

I am in college and the only way for me to update ubuntu is through Tor. I have configured firefox chromium which was not much of a deal. The real issue for me is Synaptic an apt-get. Tor only...