Your boot options (menu) are in boot.ini, but in the /Boot/BCD with Windows 7 and later versions of Windows.
In Linux it is the boot flag, Windows calls it active partition. They mean the same thing.
If in Live installer's terminal using fdisk (sudo fdisk -l) you see boot flag as an * .
If you copy BCD it should have same entries, but not sure if different partition makes a difference or not, it may still need repairs.
To fully understand Windows booting, go back and review the multibooters site, link in post #2.
f8 to get to repair install screen, if you can start to boot
http://www.sevenforums.com/tutorials...t-options.html
http://www.sevenforums.com/tutorials...up-repair.html
http://www.w7forums.com/startup-repair-t441.html
https://support.microsoft.com/en-us/kb/927392/
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