You can add an entry to your sudoers file so that the setpci command can be run without prompting for a password.
First run the following commands to open the sudoers file for editing...
Code:
sudo -i
EDITOR=nano visudo
Now add the following line to the bottom of the file replacing username with your actual username.
Code:
username ALL=(ALL) NOPASSWD: /usr/bin/setpci
Hit CTRL+x and save the file and then exit your root shell.
You should now be able to run 'sudo setpci -s 00:02.0 F4.B=15' without being prompted for a password, so just add the command to your startup applications using the 'Startup Applications' application.
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