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Thread: treatment of text either by AWK or SHELL script

  1. #1
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    treatment of text either by AWK or SHELL script

    Hello,

    I need to treat a text file. called xxx.bib. It contains about 3000 lines, mainly with " % " sign, .. title= and url= etc. The count of title rows is 229 and same for url.
    Code:
    %
    @INPROCEEDINGS{LiuH2006,
    author={Liu, H. and Wan, P. and Jia, X. and Liu, X. and Yao, F.},
    booktitle={INFOCOM 2006. 25th IEEE International Conference on Computer Communications. Proceedings}, 
    title={Efficient Flooding Scheme Based on 1-Hop Information in Mobile Ad Hoc Networks},
    year={2006},
    month={april },
    volume={},
    number={},
    pages={1 -12},
    keywords={},
    doi={10.1109/INFOCOM.2006.17},
    url={http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=4146670},
    ISSN={0743-166X},}
    %
    @INPROCEEDINGS{ZhaoJ2006,
    author={Zhao, J. and Cao, G.},
    booktitle={INFOCOM 2006. 25th IEEE International Conference on Computer Communications. Proceedings}, 
    title={VADD: Vehicle-Assisted Data Delivery in Vehicular Ad Hoc Networks},
    year={2006},
    month={april },
    volume={},
    number={},
    pages={1 -12},
    keywords={},
    doi={10.1109/INFOCOM.2006.298},
    url={http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=4146951},
    ISSN={0743-166X},}
    %
    What I want, I want to copy the url e.g. " http://ieeexplore.ieee.org/xpl/artic...number=4146951 " and want to embed it with the title row as like, " \href{http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=4146951},
    The title row eventually should look like this, I don't want to remove url= line.
    Code:
    title={\href{http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=4146951}{VADD: Vehicle-Assisted Data Delivery in Vehicular Ad Hoc Networks}}
    Attention, in each bibtex reference file, specific url is for the specific corresponding title.

    Could anyone please help me out about coding or any help to create AWK or SHELL script etc.
    I will be very much thankful to you for your cooperation.
    NahkNarmi Ubuntu14.04 LTS Dell LATITUDE | E5400 32 bits | 2.00 GHz 1 GB RAM | 120 HDD


  2. #2
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    BibTeX

    If you work with perl scripting instead of the shell, you have the advantage of two CPAN modules, Text::BibTeX and BibTeX::Parser. So that work has already been done for you. Text::BibTeX is available in the repository as libtext-bibtex-perl.

  3. #3
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    perl Text::BibTeX

    This changes the title, there is probably an OO way, but it does produce the output you wanted.

    Code:
    #!/usr/bin/perl                                                                 
    
    use strict;
    use warnings;
    use Text::BibTeX;
    
    my $bibfile = new Text::BibTeX::File 'xxx.bib';
    my $newfile = new Text::BibTeX::File '>zzz.bib';
    
    while (my $entry = new Text::BibTeX::Entry $bibfile) {
    
        my ($author, $title, $url) = $entry->get ('author', 'title', 'url');
        print qq($author\n\t$title\n\t$url\n\n);
    
        $title = qq({\\href{$url}{$title}});
        $entry->set ('title', $title);
        $entry->write ($newfile);
    
    }
    Last edited by Lars Noodén; November 6th, 2012 at 11:24 AM. Reason: tidied code

  4. #4
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    Re: treatment of text either by AWK or SHELL script

    Thanks you so much Lars ,

    It is really helpful, and thats I was searching.

    Here I came to install Text::BibTeX, but there is some error, I don"t know , how to solve it,

    Everthing goes fine like below, make and make test commands, but not make install,
    Code:
    khan@khan:~/textBibTex/Text-BibTeX-0.34$ ls
    BibTeX     BibTeX.c  BibTeX.pm  blib     btformat       btparse       btsort          btxs_support.h  CHANGES   Makefile     MANIFEST    README  typemap
    BibTeX.bs  BibTeX.o  BibTeX.xs  btcheck  btool_faq.pod  btparse-0.33  btxs_support.c  btxs_support.o  examples  Makefile.PL  pm_to_blib  t
    khan@khan:~/textBibTex/Text-BibTeX-0.34$ make
    khan@khan:~/textBibTex/Text-BibTeX-0.34$ make test
    PERL_DL_NONLAZY=1 /usr/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
    t/bib.t ......... ok     
    t/macro.t ....... ok     
    t/modify.t ...... ok     
    t/nameformat.t .. ok   
    t/namelist.t .... ok     
    t/names.t ....... ok     
    t/output.t ...... ok     
    t/parse.t ....... ok     
    t/parse_f.t ..... ok     
    t/parse_s.t ..... ok     
    t/purify.t ...... ok     
    All tests successful.
    Files=11, Tests=337,  0 wallclock secs ( 0.09 usr  0.03 sys +  0.34 cusr  0.07 csys =  0.53 CPU)
    Result: PASS
    make install command shows the below error,
    Code:
    khan@khan:~/textBibTex/Text-BibTeX-0.34$ make install
    Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
    !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
    ERROR: Can't create '/usr/local/lib/perl/5.10.1/Text'
    mkdir /usr/local/lib/perl: Permission denied at /usr/share/perl/5.10/ExtUtils/Install.pm line 483
    
    !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
     at -e line 1
    make: *** [pure_site_install] Error 13
    Then I tried to create manually the desired directories , (/usr/local/lib/perl/5.10.1/Text) by going into root.

    when i repeat the procedure to install, make install, There is change in error but it exists
    Code:
    khan@khan:~/textBibTex/Text-BibTeX-0.34$ make install
    Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
    !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
    ERROR: Can't create '/usr/local/lib/perl/5.10.1/Text'
    Do not have write permissions on '/usr/local/lib/perl/5.10.1/Text'
    !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
     at -e line 1
    make: *** [pure_site_install] Error 13
    I thank in advance for any help please
    NahkNarmi Ubuntu14.04 LTS Dell LATITUDE | E5400 32 bits | 2.00 GHz 1 GB RAM | 120 HDD


  5. #5
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    Re: treatment of text either by AWK or SHELL script

    Use "sudo make install" instead. The installer is trying to write to directories that are owned by the root user.
    If you ask for help, do not abandon your request. Please have the courtesy to check for responses and thank the people who helped you.

    Blog · Linode System Administration Guides · Android Apps for Ubuntu Users

  6. #6
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    Re: treatment of text either by AWK or SHELL script

    Thank you so much,
    it works with
    Code:
    sudo make install
    Just a little point did not get ,
    NahkNarmi Ubuntu14.04 LTS Dell LATITUDE | E5400 32 bits | 2.00 GHz 1 GB RAM | 120 HDD


  7. #7
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    Re: perl Text::BibTeX

    Thanks you so much,
    The code you have provided, it works well.

    Its so interesting to work on .bib files. I thank you again to introduce it to me.

    cheers !
    NahkNarmi Ubuntu14.04 LTS Dell LATITUDE | E5400 32 bits | 2.00 GHz 1 GB RAM | 120 HDD


  8. #8
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    Ubuntu package repository

    Glad it worked. The easy way on Ubuntu to grab Text::BibTeX, or any other CPAN module, is to use the package in the repository. That will also make it easy to update, if the need ever arises.

    You can find them using Synaptic or apt-cache. In this case the package you are looking for is libtext-bibtex-perl There is just about anything imaginable there.

    Have fun.

  9. #9
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    Re: treatment of text either by AWK or SHELL script

    Thanks you so much again for your help .
    NahkNarmi Ubuntu14.04 LTS Dell LATITUDE | E5400 32 bits | 2.00 GHz 1 GB RAM | 120 HDD


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