Fantastic! This is something that's needed very badly. Many thanks for putting this together. Now, that being said, here are my complaints.
* You have to configure the input for every game you play
* It ask you to program every input twice
* Doesn't remember ROM folder
* No options for screen size / full screen
I'm not sure how many of these relate to your interface and how many are simply the limitations of
FCEU. However, if you want to take a look at some excellent emulator interfaces check out Mupen 64, ZSNES, or gxmame. There is also gTuxNES (NES emulator GUI), but it's just not very good imo.
P.S. - If this thing gets popular and you need help with hosting, I can lend a hand.
Edit: Also, here's a
list of NES emulators for Linux. One of them might serve as a better back-end than
FCEU. (The link is a google cahce since the actual page seems to be down, so you will have to search for each emulator individually)
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