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rabbiedoo
January 9th, 2009, 12:37 PM
I played safe and installed gromacs 3.3.2 using the synaptic package manager, and on searching it shows up green. However, I may be stupid, but after much searching I failed to run it. Please help an idiot? :(

LaserJock
January 9th, 2009, 05:12 PM
You might try to see if this tutorial helps:

http://md.chem.rug.nl/education/mdcourse/index.html

naps.349
February 5th, 2009, 09:06 PM
hi there, im not a english speaker so sorry by my english.
Rabbiedoo, the solution for the problem is in this link

http://ubuntuforums.org/newreply.php?do=newreply&noquote=1&p=6523995

there is a complete list of basic commands for GROMACS, in a terminal you have to put it without sudo.
Is very hard learn and use GROMACS, so good luck!, see you

coffee is the colour
February 17th, 2009, 11:43 AM
I generally have the same problem. In the synaptic package manager it says gromacs is installed (green) but I can't locate the configure command in order to configure gromacs. I am following the installation instructions given on the gromacs website, so this is before I attempt to run gromacs.

I am using a Dell Precision T3400, Intel Core Duo 2, with ubuntu 7.10 64 bit.

Any suggestions?